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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HACL1, 2-hydroxyacyl-CoA lyase 1
Sequence ID:NM_012260
Entrez Gene ID:26061
Ensembl ID:ENSG00000131373

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 15602252 - 15642979

 Exon Info From UCSC:
NM_012260

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538159Full LengthBC0016272-hydroxyacyl-CoA lyase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036392  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012260 NP_036392 Q9UJ83 TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N

Related Sequences

 
mRNAGenPeptSwissProt
AF161397 AAF28957 Q9UJ83
BC001627 AAH01627 Q9UJ83
BC007440 AAH07440 Q7Z773
DQ895558 ABM86484  
EU176367 ABW03818  
AK056977 BAG51836 B3KPX4
AK301546 BAG63043 B4DWI1
AK301990 BAG63397 B4DXI5
AK302086 BAG63473 B4DXR1
AJ131753 CAB60200 Q9UJ83

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HACL1 NP_036392 M.musculus Hacl1 56794 Gene Info NP_064359 88
R.norvegicus Hacl1 85255   NP_445945 86
A.gambiae AgaP_AGAP010368 1272675   XP_311576 55
D.melanogaster CG11208 37285   NP_611460 53
C.elegans B0334.3 174758   NP_496454 49
S.pombe SPBC725.04 2541142   NP_595484 46
A.thaliana AT5G17380 831604   NP_197240 43
S.cerevisiae YEL020C 856694   NP_010895 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)