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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. H2AFB3, H2A histone family, member B3
Sequence ID:NM_080720
Entrez Gene ID:83740
Ensembl ID:ENSG00000185978

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 154610435 - 154610783

NM_080720 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146541Full LengthBC130510H2A histone family, member B3
40146543Full LengthBC130512H2A histone family, member B3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542451  

Protein Infomation

NM_001017991 NP_001017991   Histone
NM_080720 NP_542451 P0C5Z0 Histone

Related Sequences

BC101409 AAI01410 P0C5Z0
BC101415 AAI01416 P0C5Z0
BC101417 AAI01418 P0C5Z0
BC101418 AAI01419 P0C5Z0
BC130510 AAI30511 P0C5Z0
BC130512 AAI30513 P0C5Z0
BC134365 AAI34366 P0C5Z0
AF254576 AAL01652 P0C5Z0
HQ258044 ADR82798  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens H2AFB3 NP_542451 H.sapiens H2AFB2 474381 Gene Info NP_001017991 100
H.sapiens H2AFB1 474382 Gene Info NP_001017990 99
M.musculus H2afb3-ps 624957   XP_894594 57
M.musculus Gm14920 100039319 Gene Info NP_001096135 56
M.musculus H2afb2-ps 624153   XP_893765 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)