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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR45, WD repeat domain 45
Sequence ID:NM_001029896
NM_007075
Entrez Gene ID:11152
Ensembl ID:ENSG00000196998

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48932101 - 48937520

 Exon Info From UCSC:
NM_001029896
NM_007075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822742Full LengthBC000464WD repeat domain 45
2822742Full LengthBC003037WD repeat domain 45
5801768Full LengthBC069206WD repeat domain 45
4156276IncompleteBC009027WD repeat domain 45

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001029896 NP_001025067 Q9Y484  
NM_007075 NP_009006   WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC000464 AAH00464 Q9Y484
BC003037 AAH03037 Q9Y484
BC009027 AAH09027 Q9Y484
BC069206 AAH69206 Q9Y484
AY691428 AAV80764 Q9Y484
DQ892245 ABM83171  
DQ895446 ABM86372  
AK301084 BAG62688 B4DVH6
AJ005897 CAA06754 Q9Y484
CR456725 CAG33006 Q9Y484

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR45 NP_009006 M.musculus Wdr45 54636 Gene Info NP_758960 98
C.elegans Y39A1A.1 189705   NP_871659 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)