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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UPK3A, Uroplakin 3A
Sequence ID:NM_006953
NM_001167574
RefSeqGene ID:NG_016203
Entrez Gene ID:7380
Ensembl ID:ENSG00000100373

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RENAL ADYSPLASIARET

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 45681865 - 45691600

 Exon Info From UCSC:
NM_006953
NM_001167574

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262218Full LengthBC069544uroplakin 3A
40004236Full LengthBC108900uroplakin 3A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167574 NP_001161046    
NM_006953 NP_008884 O75631  

Related Sequences

 
mRNAGenPeptSwissProt
AF085808 AAC34888 O75631
BC069544 AAH69544 O75631
BC108900 AAI08901 O75631
AB010116 BAA25678 O75631
AB010637 BAA31460 O75631
CR456608 CAG30494 O75631
CU013204 CAK54635  
CU013492 CAK54934  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UPK3A NP_008884 R.norvegicus Upk3a 315190   NP_001123979 85
M.musculus Upk3a 22270 Gene Info NP_075967 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)