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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SNRNP35, Small nuclear ribonucleoprotein 35kDa (U11/U12)
Sequence ID:NM_022717
NM_180699
Entrez Gene ID:11066
Ensembl ID:ENSG00000184209

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 123942673 - 123954323

 Exon Info From UCSC:
NM_022717
NM_180699

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3893396Full LengthBC009622small nuclear ribonucleoprotein 35kDa (U11/U12)
3901191Full LengthBC054034small nuclear ribonucleoprotein 35kDa (U11/U12)
5767646Full LengthBC047678small nuclear ribonucleoprotein 35kDa (U11/U12)
7939516Full LengthBC093671small nuclear ribonucleoprotein 35kDa (U11/U12)
8327423Full LengthBC111955small nuclear ribonucleoprotein 35kDa (U11/U12)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_851030  NP_073208  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022717 NP_073208 Q16560 RRM_1
NM_180699 NP_851030   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U44798 AAA86654 Q16560
U44799 AAA86655 Q16560
BC009622 AAH09622 Q16560
BC047678 AAH47678 Q16560
BC054034 AAH54034 Q16560
BC093671 AAH93671 Q16560
BC111955 AAI11956 Q16560
HQ447429 ADQ31915  
AK290127 BAF82816 Q16560
BK005197 DAA05495 Q16560

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNRNP35 NP_851030 M.musculus Snrnp35 76167 Gene Info NP_083808 90
R.norvegicus Snrnp35 360803   NP_001014149 89
A.thaliana AT2G43370 818938   NP_850395 54
A.gambiae AgaP_AGAP012250 1280439   XP_320292 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)