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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TSFM, Ts translation elongation factor, mitochondrial
Sequence ID:NM_001172695
NM_001172696
NM_001172697
NM_005726
RefSeqGene ID:NG_016971
Entrez Gene ID:10102
Ensembl ID:ENSG00000123297

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 3 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 58176581 - 58190367

 Exon Info From UCSC:
NM_001172695
NM_001172696
NM_001172697
NM_005726

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4076880Full LengthBC022862Ts translation elongation factor, mitochondrial
30722527Full LengthBC093068Ts translation elongation factor, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005717  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172695 NP_001166166    
NM_001172696 NP_001166167    
NM_001172697 NP_001166168    
NM_005726 NP_005717 P43897 UBA
EF_TS

Related Sequences

 
mRNAGenPeptSwissProt
L37936 AAC37577 P43897
AF110399 AAD20224 P43897
BC022862 AAH22862 P43897
BC093068 AAH93068 P43897
AK295323 BAG58300 B4DHY8
AK304621 BAG65403 P43897

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSFM NP_001166167 M.musculus Tsfm 66399 Gene Info NP_079813 86
A.gambiae AgaP_AGAP009234 1280189   XP_320011 47
D.melanogaster CG6412 35060   NP_609847 42
C.elegans tsfm-1 179683   NP_506079 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)