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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GLI1, GLI family zinc finger 1
Sequence ID:NM_001160045
NM_001167609
NM_005269
RefSeqGene ID:NG_029564
Entrez Gene ID:2735
Ensembl ID:ENSG00000111087

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.2-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57853967 - 57858532

 Exon Info From UCSC:
NM_001160045
NM_001167609
NM_005269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3531657Full LengthBC013000GLI family zinc finger 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160045 NP_001153517    
NM_001167609 NP_001161081    
NM_005269 NP_005260 P08151 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC013000 AAH13000 P08151
GQ890670 ACX35434 P08151
AB239135 BAG16751 B1Q2M2
AK297899 BAG60219 B4DNF7
X07384 CAA30297 P08151

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GLI1 NP_005260 M.musculus Gli1 14632 Gene Info NP_034426 86
R.norvegicus Gli1 140589   XP_345833 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta