Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CXCL10, Chemokine (C-X-C motif) ligand 10
Sequence ID:NM_001565
Entrez Gene ID:3627
Ensembl ID:ENSG00000169245

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 76942272 - 76944650

NM_001565 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
88367694227276943100
8379267694351876943607
92710537694384376943969
105411807694452376944649

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4274617Full LengthBC010954chemokine (C-X-C motif) ligand 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001556  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001565 NP_001556 P02778 IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC010954 AAH10954 P02778
DQ892786 ABM83712  
DQ896033 ABM87032  
X02530 CAA26370 P02778

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCL10 NP_001556 M.musculus Cxcl10 15945 Gene Info NP_067249 68
R.norvegicus Cxcl10 245920   NP_620789 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)