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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HFE2, hemochromatosis type 2 (juvenile)
Sequence ID:NM_145277
NM_202004
NM_213652
NM_213653
RefSeqGene ID:NG_011568
Entrez Gene ID:148738
Ensembl ID:ENSG00000168509

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HEMOCHROMATOSIS, TYPE 2AHAMP

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 145413277 - 145417542

 Exon Info From UCSC:
NM_145277
NM_202004
NM_213652
NM_213653

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6198223Full LengthBC085604hemochromatosis type 2 (juvenile)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_973733  NP_998817  NP_660320  NP_998818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145277 NP_660320   RGM_C
RGM_N
NM_202004 NP_973733   RGM_C
NM_213652 NP_998817   RGM_C
NM_213653 NP_998818 Q6ZVN8 RGM_C
RGM_N

Related Sequences

 
mRNAGenPeptSwissProt
BC017926 AAH17926 Q6ZVN8
BC085604 AAH85604 Q6ZVN8
AY372521 AAR22390 Q6ZVN8
HQ447765 ADQ32250  
AK092682 BAC03944 Q6ZVN8
AK092692 BAC03947 Q6ZVN8
AK096905 BAC04890 Q6ZVN8
AK124273 BAC85823 Q6ZVN8
AK290831 BAF83520 A8K466
AK292742 BAF85431 A8K9M7
AK315852 BAF98743 A8K466

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HFE2 NP_998818 M.musculus Hfe2 69585 Gene Info NP_081402 89
R.norvegicus Hfe2 310681   NP_001012080 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)