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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. TAF13, TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
Sequence ID:NM_005645
Entrez Gene ID:6884
Ensembl ID:ENSG00000197780

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 109607144 - 109618620

NM_005645 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40123243Full LengthBC121180TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
40123247Full LengthBC121181TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005636  

Protein Infomation

NM_005645 NP_005636 Q15543 TFIID-18kDa

Related Sequences

BC121180 AAI21181 Q15543
BC121181 AAI21182 Q0VA92
AK312158 BAG35092 Q15543
X84003 CAA58827 Q15543

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens TAF13 NP_005636 M.musculus Taf13 99730 Gene Info NP_079720 100
D.melanogaster Taf13 35297   NP_610024 83
A.gambiae AgaP_AGAP008045 1277907   XP_317417 76
A.thaliana TAF13 837962   NP_171768 59
C.elegans taf-13 192052   NP_496289 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)