Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRSF5, serine/arginine-rich splicing factor 5
Sequence ID:NM_001039465
NM_006925
Entrez Gene ID:6430
Ensembl ID:ENSG00000100650

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70234873 - 70235639

 Exon Info From UCSC:
NM_001039465
NM_006925

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346982Full LengthBC018823splicing factor, arginine/serine-rich 5
4823314Full LengthBC040209splicing factor, arginine/serine-rich 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008856  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039465 NP_001034554 Q13243  
NM_006925 NP_008856   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U30826 AAA93070 Q13243
U30884 AAA93074 Q13243
U30827 AAB60405 Q13243
BC018823 AAH18823 Q13243
BC040209 AAH40209 Q13243
BT007089 AAP35752 Q13243
AB209804 BAD93041 Q59EK7
AK311805 BAG34748 Q13243
AK296113 BAG58862 B4DJK0
AK300560 BAG62266 B4DUA4
AB451250 BAG70064 Q13243
AB451374 BAG70188 B5BUD8
BX247988 CAD62322 Q86U32
BX640605 CAE45711 Q13243
CR542167 CAG46964 Q13243
CR542182 CAG46979 Q13243

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRSF5 NP_001034554 M.musculus Srsf5 20384 Gene Info NP_033185 99
R.norvegicus Srsf5 29667   NP_062130 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)