Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAP1LC3A, microtubule-associated protein 1 light chain 3 alpha
Sequence ID:NM_032514
NM_181509
Entrez Gene ID:84557
Ensembl ID:ENSG00000101460

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 33146526 - 33148149

 Exon Info From UCSC:
NM_032514
NM_181509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3909192Full LengthBC015810microtubule-associated protein 1 light chain 3 alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115903  NP_852610  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032514 NP_115903 Q9H492 MAP1_LC3
NM_181509 NP_852610   MAP1_LC3

Related Sequences

 
mRNAGenPeptSwissProt
BC015810 AAH15810 Q9H492
AF276658 AAK35151 Q9H492
BT007452 AAP36120 Q9H492
DQ893641 ABM84567  
DQ895536 ABM86462  
AL833855 CAD38714 Q9H492
AM392590 CAL37468  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAP1LC3A NP_115903 M.musculus Map1lc3a 66734 Gene Info NP_080011 100
R.norvegicus Map1lc3a 362245   NP_955794 100
C.elegans lgg-2 177989   NP_502035 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)