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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RUNDC1, RUN domain containing 1
Sequence ID:NM_173079
Entrez Gene ID:146923
Ensembl ID:ENSG00000198863

Database Links

UniGeneEntrez GeneEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 41144426 - 41145618

NM_173079 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15104113258141133090
5116694113927241139430
6708684114135741141555
8699884114233341142452
98938284114286741145706

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5271271Full LengthBC039247RUN domain containing 1
4384737IncompleteBC014873RUN domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775102  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173079 NP_775102   RUN

Related Sequences

 
mRNAGenPeptSwissProt
BC014873 AAH14873 Q96C34
BC039247 AAH39247 Q96C34
AY189284 AAO86728 Q96C34
AL831813 CAD38528 Q96C34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RUNDC1 NP_775102 M.musculus Rundc1 217201 Gene Info NP_766154 90
A.gambiae AgaP_AGAP004080 1270879   XP_309632 41
D.melanogaster CG3703 31045   NP_569874 39
C.elegans T19D7.4 180416   NP_508136 37