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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CAMTA2, calmodulin binding transcription activator 2
Sequence ID:NM_001171166
NM_001171167
NM_001171168
NM_015099
Entrez Gene ID:23125
Ensembl ID:ENSG00000108509

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 4871292 - 4890921

 Exon Info From UCSC:
NM_001171166
NM_001171167
NM_001171168
NM_015099

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862515Full LengthBC167148calmodulin binding transcription activator 2
8862516Full LengthBC167149calmodulin binding transcription activator 2
8862527Full LengthBC167151calmodulin binding transcription activator 2
8862594Full LengthBC167160calmodulin binding transcription activator 2
9020524Full LengthBC136534calmodulin binding transcription activator 2
9052752Full LengthBC144232calmodulin binding transcription activator 2
40148717Full LengthBC142695calmodulin binding transcription activator 2
3840178IncompleteBC010050calmodulin binding transcription activator 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055914  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171166 NP_001164637    
NM_001171167 NP_001164638    
NM_001171168 NP_001164639    
NM_015099 NP_055914 O94983 Ank
IQ
TIG
CG-1

Related Sequences

 
mRNAGenPeptSwissProt
BC010050 AAH10050 O94983
BC016163 AAH16163 O94983
BC032381 AAH32381 Q8N5H1
BC136534 AAI36535 O94983
BC142695 AAI42696 A5PL10
BC144232 AAI44233 B7ZM30
BC167148 AAI67148 B2RZG4
BC167149 AAI67149 B2RZG4
BC167151 AAI67151 B2RZG4
BC167160 AAI67160 B2RZG4
EU832229 ACE86799  
EU832136 ACE87486  
AB020716 BAA74932 O94983
AK302528 BAG63801 B4DYN9
AL831849 CAD38553 O94983
AL833974 CAD38818 O94983

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAMTA2 NP_055914 M.musculus Camta2 216874 Gene Info NP_835217 93
R.norvegicus Camta2 287462   NP_001099271 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)