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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RECQL5, RecQ protein-like 5
Sequence ID:NM_004259
NM_001003716
NM_001003715
RefSeqGene ID:NG_029617
Entrez Gene ID:9400
Ensembl ID:ENSG00000108469

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73647261 - 73662637

 Exon Info From UCSC:
NM_004259
NM_001003716
NM_001003715

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5529486Full LengthBC063440RecQ protein-like 5
3162376IncompleteBC000570RecQ protein-like 5
3629492IncompleteBC005103RecQ protein-like 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001003715  NP_001003716  NP_004250  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001003715 NP_001003715     DEAD
Helicase_C
NM_001003716 NP_001003716     DEAD
Helicase_C
NM_004259 NP_004250 Q6P4G0
O94762
EC 3.6.4.12 DEAD
Helicase_C
RecQ5

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF193041 AAG22469 Q8WYH5  
BC000570 AAH00570 Q9BW80  
BC005103 AAH05103 Q9BSD6  
BC016911 AAH16911 O94762 EC 3.6.4.12
BC063440 AAH63440 Q6P4G0  
EF560729 ABQ59039 A5YM55  
AB006533 BAA74454 O94762 EC 3.6.4.12
AB042823 BAA95952 O94762 EC 3.6.4.12
AB042824 BAA95953 O94762 EC 3.6.4.12
AB042825 BAA95954 O94762 EC 3.6.4.12
AK075084 BAG52064 B3KQK2  
AK304168 BAH14123 B7Z8Y7  
AL136869 CAB66803 O94762 EC 3.6.4.12
CR533497 CAG38528 Q6FIC9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RECQL5 NP_004250 M.musculus Recql5 170472 Gene Info NP_569721 80
R.norvegicus Recql5 287834   NP_001099323 78
A.gambiae AgaP_AGAP001254 1281918   XP_321896 49
D.melanogaster RecQ5 39594   NP_729983 45
C.elegans rcq-5 175522   NP_497810 41
A.thaliana RecQl3 829727   NP_195299 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)