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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGB4, integrin, beta 4
Sequence ID:NM_000213
NM_001005619
NM_001005731
RefSeqGene ID:NG_007372
Entrez Gene ID:3691
Ensembl ID:ENSG00000132470

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPIDERMOLYSIS BULLOSA OF HANDS AND FEETKRT14
KRT5
EPIDERMOLYSIS BULLOSA, JUNCTIONAL, NON-HERLITZ TYPECOL17A1
COL17A1
LAMA3
LAMB3
LAMC2
EPIDERMOLYSIS BULLOSA, JUNCTIONAL, WITH PYLORIC ATRESIAITGA6

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73717605 - 73751884

 Exon Info From UCSC:
NM_000213
NM_001005619
NM_001005731

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992127Full LengthBC126411integrin, beta 4
9052252Full LengthBC143738integrin, beta 4
9052256Full LengthBC143742integrin, beta 4
40073279Full LengthBC118916integrin, beta 4
40027121IncompleteBC109238integrin, beta 4

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000213 NP_000204 P16144  
NM_001005619 NP_001005619    
NM_001005731 NP_001005731    

Related Sequences

 
mRNAGenPeptSwissProt
AF011375 AAB65421 P16144
BC109238 AAI09239 Q2VP98
BC118916 AAI18917 Q0VF97
BC126411 AAI26412 P16144
BC143738 AAI43739 B7ZLD5
BC143742 AAI43743 B7ZLD8
AB208913 BAD92150 Q59H46
AK304792 BAG65542 B4E3N0
X51841 CAA36134 P16144
X52186 CAA36433 P16144
X53587 CAA37656 P16144

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGB4 NP_000204 M.musculus Itgb4 192897 Gene Info NP_001005608 88
R.norvegicus Itgb4 25724   NP_037312 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)