Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CARHSP1, calcium regulated heat stable protein 1, 24kDa
Sequence ID:NM_001042476
NM_014316
Entrez Gene ID:23589
Ensembl ID:ENSG00000153048

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 8948769 - 8953193

 Exon Info From UCSC:
NM_001042476
NM_014316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900952Full LengthBC003366calcium regulated heat stable protein 1, 24kDa
4430943Full LengthBC108283calcium regulated heat stable protein 1, 24kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055131  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042476 NP_001035941 Q9Y2V2  
NM_014316 NP_055131   CSD

Related Sequences

 
mRNAGenPeptSwissProt
AF115345 AAD25021 Q9Y2V2
BC003366 AAH03366 Q9Y2V2
BC108283 AAI08284 Q9Y2V2
EU831872 ACE86631  
EU831795 ACE87313  
AK311777 BAG34720 Q9Y2V2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CARHSP1 NP_001035941 R.norvegicus Carhsp1 260416   NP_690003 97
M.musculus Carhsp1 52502 Gene Info NP_080097 97
M.musculus Gm9791 100040232   XP_001474936 97
A.gambiae AgaP_AGAP005641 1276327   XP_315660 60
D.melanogaster CG9705 39875   NP_730197 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)