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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBC1D10B, TBC1 domain family, member 10B
Sequence ID:NM_015527
Entrez Gene ID:26000
Ensembl ID:ENSG00000169221

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 30369264 - 30380998

NM_015527 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3915113036842130369893
151216663036998330370137
166718563037049230370681
185719223037085830370923
192320373037104730371161
203821443037622030376326
214522523037642530376532
225323523037681530376914
235333263038054830381521

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6184429Full LengthBC072453TBC1 domain family, member 10B
7939659Full LengthBC093814TBC1 domain family, member 10B
7939661Full LengthBC093816TBC1 domain family, member 10B
5518595IncompleteBC050523TBC1 domain family, member 10B
6644878IncompleteBC098419TBC1 domain family, member 10B
6733189IncompleteBC063112TBC1 domain family, member 10B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056342  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015527 NP_056342 Q4KMP7 TBC

Related Sequences

 
mRNAGenPeptSwissProt
BC050523 AAH50523 Q4KMP7
BC063112 AAH63112 Q4KMP7
BC072453 AAH72453 Q4KMP7
BC093814 AAH93814 Q4KMP7
BC093816 AAH93816 Q4KMP7
BC098419 AAH98419 Q4KMP7
AF370370 AAQ15206 Q4KMP7
EU446789 ABZ92318  
AK002101 BAA92086 Q4KMP7
AK023192 BAB14454 Q4KMP7
AB449895 BAH16638 Q4KMP7
AL117408 CAB55908 Q4KMP7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBC1D10B NP_056342 R.norvegicus Tbc1d10b 365372   XP_344966 92
M.musculus Tbc1d10b 68449 Gene Info NP_653105 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)