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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FANCF, Fanconi anemia, complementation group F
Sequence ID:NM_022725
RefSeqGene ID:NG_007425
Entrez Gene ID:2188
Ensembl ID:ENSG00000183161

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
FANCONI ANEMIA, COMPLEMENTATION GROUP ABRCA2
FANCA
FANCB
FANCC
FANCD2
FANCE
FANCG

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 22646083 - 22647360

NM_022725 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
133092264407822647386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5239725Full LengthBC063038Fanconi anemia, complementation group F
5538578Full LengthBC047028Fanconi anemia, complementation group F
7939712Full LengthBC093867Fanconi anemia, complementation group F
8069313Full LengthBC101807Fanconi anemia, complementation group F

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022725 NP_073562 Q9NPI8  

Related Sequences

 
mRNAGenPeptSwissProt
AF181994 AAF26297 Q9NPI8
AF181995 AAF26298 Q9NPI8
BC047028 AAH47028 Q9NPI8
BC063038 AAH63038 A3KME0
BC093867 AAH93867 Q9NPI8
BC101807 AAI01808 Q9NPI8
AK023153 BAB14433 Q9NPI8
AK223277 BAD96997 Q53FK7
AK001716 BAG50967 A3KME0
BX640996 CAE45999 Q6MZN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FANCF NP_073562 R.norvegicus Fancf 499155   XP_574453 56
M.musculus Fancf 100040608 Gene Info NP_001108559 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta