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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNJ5, potassium inwardly-rectifying channel, subfamily J, member 5
Sequence ID:NM_000890
RefSeqGene ID:NG_023406
Entrez Gene ID:3762
Ensembl ID:ENSG00000120457

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 128781168 - 128786626

NM_000890 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1304128761312128761615
3051251128781158128782104
12522897128786303128787948

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262288Full LengthBC069499potassium inwardly-rectifying channel, subfamily J, member 5
7262347Full LengthBC069571potassium inwardly-rectifying channel, subfamily J, member 5
7262359Full LengthBC069386potassium inwardly-rectifying channel, subfamily J, member 5
7262371Full LengthBC069482potassium inwardly-rectifying channel, subfamily J, member 5
30915329Full LengthBC074838potassium inwardly-rectifying channel, subfamily J, member 5
30915550Full LengthBC074839potassium inwardly-rectifying channel, subfamily J, member 5
6912762IncompleteBC096834potassium inwardly-rectifying channel, subfamily J, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000881  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000890 NP_000881 P48544 IRK

Related Sequences

 
mRNAGenPeptSwissProt
L47208 AAB07269 P48544
U39195 AAB53093 P48544
BC069386 AAH69386 P48544
BC069482 AAH69482 P48544
BC069499 AAH69499 P48544
BC069571 AAH69571 P48544
BC074838 AAH74838 P48544
BC074839 AAH74839 P48544
BC096834 AAH96834 Q4QRJ2
HQ447428 ADQ31914  
JN859132 AFB82769 H9A8K9
JN859133 AFB82770 H9A8L0
D50134 BAA08814 P48544
AK312837 BAG35691 P48544
AB690268 BAL72885 H7CGH0
X83582 CAA58565 P48544

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNJ5 NP_000881 R.norvegicus Kcnj5 29713   NP_058993 94
M.musculus Kcnj5 16521 Gene Info NP_034735 94
A.gambiae AgaP_AGAP001283 1281896   XP_321867 51
D.melanogaster Irk2 42770   NP_001163700 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)