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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1QTNF5, C1q and tumor necrosis factor related protein 5
Sequence ID:NM_015645
NM_031433
RefSeqGene ID:NG_012235
Entrez Gene ID:114902
Ensembl ID:ENSG00000223953

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINAL DEGENERATION, LATE-ONSET, AUTOSOMAL DOMINANT 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 119211625 - 119217370

 Exon Info From UCSC:
NM_015645
NM_031433

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113621  NP_056460  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015645 NP_056460 Q9BXJ0 C1q
Collagen
NM_031433 NP_113621 Q9BY79 Ldl_recept_a
CUB
Fz

Related Sequences

 
mRNAGenPeptSwissProt
BC029485 AAH29485 Q9BXJ0
BC160191 AAI60191  
AF329841 AAK17965 Q9BXJ0
AY358383 AAQ88749 Q9BXJ0
AB055505 BAB39771 Q9BY79
AK055132 BAB70859 Q9BY79
AK295203 BAG58200 B4DHN8
AL110261 CAB53702 Q9BXJ0
AJ862823 CAH93521 Q9BY79
AJ862823 CAH93522 Q9BXJ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1QTNF5 NP_056460 R.norvegicus C1qtnf5 315598   NP_001012123 95
M.musculus C1qtnf5 235312 Gene Info NP_001035722 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)