Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EXOSC1, exosome component 1
Sequence ID:NM_016046
Entrez Gene ID:51013
Ensembl ID:ENSG00000171311

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99195751 - 99205746

NM_016046 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
26439919566699196307
6447289919694799197031
7297799919745699197506
7808139919842699198459
8149029920092799201015
9039779920299399203067
97810939920548899205603
109411509920571199205767

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4817073Full LengthBC022067exosome component 1
4295374IncompleteBC012538exosome component 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016046 NP_057130 Q9Y3B2  

Related Sequences

 
mRNAGenPeptSwissProt
AF151866 AAD34103 Q9Y3B2
BC022067 AAH22067 Q9Y3B2
JF432281 ADZ15498  
AK313717 BAG36460 Q9Y3B2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EXOSC1 NP_057130 M.musculus Exosc1 66583 Gene Info NP_079920 96
A.gambiae AgaP_AGAP008063 1277888   XP_317396 50
D.melanogaster Csl4 34548   NP_609492 50
N.crassa NCU04155 3877418   XP_961311 50
S.cerevisiae CSL4 855489   NP_014167 49
S.pombe csl4 2539351   NP_588510 47
A.thaliana AT5G38890 833880   NP_568559 46
C.elegans exos-1 176532   NP_499416 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)