Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLIT1, slit homolog 1 (Drosophila)
Sequence ID:NM_003061
Entrez Gene ID:6585
Ensembl ID:ENSG00000187122

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.3-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 98757794 - 98945683

 Exon Info From UCSC:
NM_003061

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007200Full LengthBC146761slit homolog 1 (Drosophila)
9056779Full LengthBC146851slit homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003052  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003061 NP_003052 O75093 EGF
Laminin_EGF
Laminin_G_1
LRR_1
DSL
LRRNT
LRRCT
Laminin_G_2
EGF_alliinase
FNIP
EGF_CA
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC146761 AAI46762 A6H8V1
BC146851 AAI46852 O75093
AY029183 AAK31796 O75093
AB011537 BAA32465 O75093
AB017167 BAA35184 O75093
XM_001716865 XP_001716917  
XM_001725255 XP_001725307  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLIT1 NP_003052 R.norvegicus Slit1 65047   NP_075242 95
M.musculus Slit1 20562 Gene Info NP_056563 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)