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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATE1, arginyltransferase 1
Sequence ID:NM_001001976
NM_007041
Entrez Gene ID:11101
Ensembl ID:ENSG00000107669

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 123502709 - 123687453

 Exon Info From UCSC:
NM_001001976
NM_007041

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4825006Full LengthBC022026arginyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001976  NP_008972  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001001976 NP_001001976 O95260 EC 2.3.2.8 ATE_N
ATE_C
NM_007041 NP_008972     ATE_N
ATE_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF079098 AAD12366 O95260 EC 2.3.2.8
AF079099 AAD12367 O95260 EC 2.3.2.8
BC022026 AAH22026 O95260 EC 2.3.2.8
DQ892092 ABM83018    
DQ895285 ABM86211    
AK292657 BAF85346 A8K9E2  
AK313057 BAG35887 B2R7P0  
AK124669 BAG54065 B3KWA3  
AK295642 BAG58513 B4DIK1  
AK296356 BAG59037 B4DK25  
AK299101 BAG61160 B4DR48  
AK303604 BAG64619 B4E107  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATE1 NP_008972 R.norvegicus Ate1 293526   NP_001099770 80
M.musculus Ate1 11907 Gene Info NP_038827 79
A.thaliana ATE1 830454   NP_196189 54
A.gambiae AgaP_AGAP010373 1272670   XP_311571 44
D.melanogaster Ate1 37288   NP_725939 44
C.elegans K07A1.9 172800   NP_492549 42
A.thaliana ATE2 820295   NP_187733 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)