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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. VCPIP1, valosin containing protein (p97)/p47 complex interacting protein 1
Sequence ID:NM_025054
Entrez Gene ID:80124
Ensembl ID:ENSG00000175073

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 67543474 - 67579452

NM_025054 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
351206754248967547606
512152076756369267563778
520881766757648367579451

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4823131Full LengthBC094799valosin containing protein (p97)/p47 complex interacting protein 1
3909568IncompleteBC049379valosin containing protein (p97)/p47 complex interacting protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079330  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025054 NP_079330 Q96JH7 OTU

Related Sequences

 
mRNAGenPeptSwissProt
BC049379 AAH49379 Q96JH7
BC094799 AAH94799 Q96JH7
AK026785 BAB15552 Q96JH7
AB058753 BAB47479 Q96JH7
AK297345 BAG59796 B4DM84
AL834476 CAD39135 Q96JH7
AL832606 CAD89944 Q96JH7
AM392649 CAL37527  
AM393766 CAL38641  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VCPIP1 NP_079330 M.musculus Vcpip1 70675 Gene Info NP_775619 96
R.norvegicus Vcpip1 286761   NP_789827 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)