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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC30A5, solute carrier family 30 (zinc transporter), member 5
Sequence ID:NM_001251969
NM_022902
NM_024055
RefSeqGene ID:NG_030415
Entrez Gene ID:64924
Ensembl ID:ENSG00000145740

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 68411997 - 68425894

 Exon Info From UCSC:
NM_022902
NM_024055

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016569Full LengthBC153202solute carrier family 30 (zinc transporter), member 5
3048788IncompleteBC008198solute carrier family 30 (zinc transporter), member 5
3450543IncompleteBC003411solute carrier family 30 (zinc transporter), member 5
100015608BC148650solute carrier family 30 (zinc transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075053  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001251969 NP_001238898    
NM_022902 NP_075053 Q8TAD4 Cation_efflux
NM_024055 NP_076960    

Related Sequences

 
mRNAGenPeptSwissProt
BC000808 AAH00808 Q8TAD4
BC003411 AAH03411 Q9BTR6
BC008198 AAH08198 Q8TAD4
BC017441 AAH17441 Q8TAD4
BC130452 AAI30453 Q8TAD4
BC130454 AAI30455 Q8TAD4
BC144349 AAI44350 B7ZM89
BC148650 AAI48651  
BC153202 AAI53203  
AF212235 AAK14921 Q9BY48
AF461760 AAL96437 Q8TAD4
AY089991 AAM09099 Q8TAD4
AY358505 AAQ88869 Q8TAD4
EU832017 ACE86679  
EU831923 ACE87364  
JF802034 AEG25670 F6MF26
AK022558 BAB14098 Q9H9X0
AK022818 BAB14258 Q8TAD4
AK292925 BAF85614 Q8TAD4
BX537394 CAD97636 Q8TAD4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC30A5 NP_075053 M.musculus Slc30a5 69048 Gene Info NP_075023 95
R.norvegicus Slc30a5 294698   NP_001099874 95
C.elegans Y105E8A.3 173299   NP_740931 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)