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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RFT1, RFT1 homolog (S. cerevisiae)
Sequence ID:NM_052859
RefSeqGene ID:NG_009203
Entrez Gene ID:91869
Ensembl ID:ENSG00000163933

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IN 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 53125663 - 53164454

 Exon Info From UCSC:
NM_052859

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5769824Full LengthBC043595RFT1 homolog (S. cerevisiae)
3450968IncompleteBC006846RFT1 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443091  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052859 NP_443091 Q96AA3 Rft-1

Related Sequences

 
mRNAGenPeptSwissProt
BC006846 AAH06846 Q96AA3
BC043595 AAH43595 Q96AA3
AK098811 BAC05420 Q8N779
AJ318099 CAC69544 Q96AA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RFT1 NP_443091 M.musculus Rft1 328370 Gene Info NP_808483 87
R.norvegicus Rft1 290552   NP_001129338 87
D.melanogaster CG3149 31489   NP_572246 40
A.gambiae AgaP_AGAP004419 1274562   XP_562163 39
A.thaliana AT5G07630 830656   NP_196380 36
N.crassa NCU05783 3876206   XP_960043 33
C.elegans ZK180.3 177216   NP_001023610 31
S.cerevisiae RFT1 852261   NP_009533 31
S.pombe rft1 2541221   NP_596493 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)