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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CATSPER3, cation channel, sperm associated 3
Sequence ID:NM_178019
Entrez Gene ID:347732
Ensembl ID:ENSG00000152705

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 134303613 - 134347386

NM_178019 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1184134303595134303778
185338134305628134305781
339578134331962134332201
579761134343646134343828
762902134344530134344670
9031022134345060134345179
10231180134346062134346219
11811367134347210134347396

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5166215Full LengthBC110384cation channel, sperm associated 3
8069198Full LengthBC101692cation channel, sperm associated 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_821138  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178019 NP_821138 Q86XQ3 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC101692 AAI01693 Q86XQ3
BC110384 AAI10385 Q86XQ3
AY156951 AAO13012 Q86XQ3
AF432876 AAO85416 Q86XQ3
AK292427 BAF85116 A8K8R2
BN000272 CAE30476 Q86XQ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CATSPER3 NP_821138 M.musculus Catsper3 76856 Gene Info NP_084048 67
R.norvegicus Catsper3 290989   NP_001099571 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)