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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSNK1D, casein kinase 1, delta
Sequence ID:NM_001893
NM_139062
RefSeqGene ID:NG_012828
Entrez Gene ID:1453
Ensembl ID:ENSG00000141551

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80202171 - 80231306

 Exon Info From UCSC:
NM_001893
NM_139062

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3546633Full LengthBC003558casein kinase 1, delta
4849869Full LengthBC015775casein kinase 1, delta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001884  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001893 NP_001884 P48730 EC 2.7.11.1
EC 2.7.11.26
Pkinase
NM_139062 NP_620693      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U29171 AAC50807 P48730 EC 2.7.11.1
EC 2.7.11.26
BC003558 AAH03558 P48730 EC 2.7.11.1
EC 2.7.11.26
BC015775 AAH15775 P48730 EC 2.7.11.1
EC 2.7.11.26
EU832435 ACE86920    
EU832350 ACE87607    
AB091044 BAC10903 P48730 EC 2.7.11.1
EC 2.7.11.26
AB209463 BAD92700 Q59FJ7  
AK291758 BAF84447 P48730 EC 2.7.11.1
EC 2.7.11.26
AK295638 BAG58511 B4DIJ9  
AK296969 BAG59513 B4DLF1  
AK303365 BAG64423 B4E0G1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSNK1D NP_620693 M.musculus Csnk1d 104318 Gene Info NP_082150 100
R.norvegicus Csnk1d 64462   NP_620691 100
A.thaliana ckl5 816466   NP_179537 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta