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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GCHFR, GTP cyclohydrolase I feedback regulator
Sequence ID:NM_005258
Entrez Gene ID:2644
Ensembl ID:ENSG00000137880

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 41056265 - 41059906

NM_005258 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11304105628441056413
1312254105802441058118
2267134105942341059910

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327730Full LengthBC112262GTP cyclohydrolase I feedback regulator
8327732Full LengthBC112264GTP cyclohydrolase I feedback regulator
9052422Full LengthBC143904GTP cyclohydrolase I feedback regulator

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005249  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005258 NP_005249 P30047 GFRP

Related Sequences

 
mRNAGenPeptSwissProt
BC112262 AAI12263 P30047
BC112264 AAI12265 P30047
BC143904 AAI43905 B7ZLM8
HQ258032 ADR82786  
AK223430 BAD97150 Q53F59
AK311872 BAG34813 P30047

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GCHFR NP_005249 R.norvegicus Gchfr 171128   NP_598279 94
M.musculus Gchfr 320415 Gene Info NP_796131 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)