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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD4, CD4 molecule
Sequence ID:NM_000616
NM_001195014
NM_001195015
NM_001195016
NM_001195017
NR_036545
RefSeqGene ID:NG_027688
Entrez Gene ID:920
Ensembl ID:ENSG00000010610

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OKT4 EPITOPE DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 6898719 - 6929150

Transcript StartTranscript EndChromosomal Start Chromosomal End
117868986506898827
17929469092376909352
29545969094726909636
46061869233076923465
61985269239246924157
853120069252216925568
1201140169262956926495
1402152369275866927707
1524159169280126928079
1592310369284646929975

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5226427Full LengthBC025782CD4 molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000607  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000616 NP_000607 P01730 ig
C2-set
NM_001195014 NP_001181943    
NM_001195015 NP_001181944    
NM_001195016 NP_001181945    
NM_001195017 NP_001181946    

Related Sequences

 
mRNAGenPeptSwissProt
M12807 AAA35572 P01730
U40625 AAB02789 Q6LCP8
S79267 AAB35273 Q13969
BC025782 AAH25782 P01730
BT019791 AAV38594 P01730
BT019811 AAV38614 P01730
DQ892052 ABM82978  
DQ895246 ABM86172  
AK315898 BAF98789 B0AZV7
AK312828 BAG35684 P01730
AK300052 BAG61861 B4DT49
AK303968 BAG64892 B4E1T0
AK316461 BAH14832 B4DT49
AK316462 BAH14833 B4DT49

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD4 NP_000607 M.musculus Cd4 12504 Gene Info NP_038516 56
R.norvegicus Cd4 24932   NP_036837 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta