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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC1A5, solute carrier family 1 (neutral amino acid transporter), member 5
Sequence ID:NM_001145144
NM_001145145
NM_005628
Entrez Gene ID:6510
Ensembl ID:ENSG00000105281

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 47278644 - 47291808

 Exon Info From UCSC:
NM_001145144
NM_001145145
NM_005628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506037Full LengthBC000062solute carrier family 1 (neutral amino acid transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145144 NP_001138616    
NM_001145145 NP_001138617    
NM_005628 NP_005619 Q15758 SDF

Related Sequences

 
mRNAGenPeptSwissProt
U53347 AAC50629 Q15758
AF102826 AAD09812 Q15758
AF105230 AAD09814 Q71UA6
AF105423 AAD27806 Q15758
BC000062 AAH00062 Q15758
AF334818 AAK77026 Q15758
DQ892148 ABM83074  
DQ895345 ABM86271  
GQ919058 ACX53626 Q15758
AB209738 BAD92975 Q59ES3
AK292690 BAF85379 Q15758
AK293433 BAG56938 B4DE27
AK299137 BAG61189 B4DR77
AK301661 BAG63136 B4DWS4
AK316546 BAH14917 B7ZB81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC1A5 NP_005619 M.musculus Slc1a5 20514 Gene Info NP_033227 84
R.norvegicus Slc1a5 292657   NP_786934 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)