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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB4B, RAB4B, member RAS oncogene family
Sequence ID:NM_016154
Entrez Gene ID:53916
Ensembl ID:ENSG00000167578

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 41284176 - 41302843

NM_016154 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11264128417041284295
1272074128592341286003
2083224128628941286403
3233854128968241289744
3865404128982541289979
5416364129256941292664
6377674129275241292882
76811404130247441302846

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5456088Full LengthBC033081RAB4B, member RAS oncogene family
5805921Full LengthBC046927RAB4B, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057238  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016154 NP_057238 P61018   Ras

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF165522 AAD45923 P61018  
AF217985 AAG17228 P61018  
BC033081 AAH33081 Q6PIK3  
BC046927 AAH46927 P61018  
AF498935 AAM21083 P61018  
AF087861 AAP97171 P61018  
EU832708 ACE87040    
EU832633 ACE87724    
HQ447628 ADQ32114    
AK291385 BAF84074 Q96KS0 EC 1.14.11.29
AK302147 BAG63518 B4DXV6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB4B NP_057238 R.norvegicus Rab4b 50866   NP_059051 100
M.musculus Rab4b 19342 Gene Info NP_083667 100
A.gambiae AgaP_AGAP004204 1274041   XP_313105 79
D.melanogaster Rab4 36992   NP_523777 77
N.crassa NCU00889 3880929   XP_964805 56
S.pombe ypt4 2542113   NP_594796 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)