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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC51A, Solute carrier family 51, alpha subunit
Sequence ID:NM_152672
Entrez Gene ID:200931
Ensembl ID:ENSG00000163959

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 195943382 - 195960301

NM_152672 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1239195943382195943620
240334195944712195944806
335489195953835195953989
490563195954534195954607
564722195954985195955143
723834195955679195955790
835981195956785195956931
9821087195959289195959394
10881453195959933195960298

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5297443Full LengthBC029606organic solute transporter alpha

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152672 NP_689885 Q86UW1  

Related Sequences

 
mRNAGenPeptSwissProt
BC029606 AAH29606 I6L9A1
AY194243 AAP23993 Q86UW1
AK172837 BAD18802 Q86UW1
AK300996 BAG62615 B4DVA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OSTalpha NP_689885 M.musculus Osta 106407 Gene Info NP_666044 83
R.norvegicus Ostalpha 303879   NP_001100557 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)