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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BATF3, basic leucine zipper transcription factor, ATF-like 3
Sequence ID:NM_018664
Entrez Gene ID:55509
Ensembl ID:ENSG00000123685

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 212859759 - 212873327

NM_018664 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13574212859759212860320
575679212870302212870406
680992212873014212873326

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126040Full LengthBC117489basic leucine zipper transcription factor, ATF-like 3
40126042Full LengthBC117491basic leucine zipper transcription factor, ATF-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061134  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018664 NP_061134 Q9NR55 bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
AF255346 AAF73966 Q9NR55
BC117489 AAI17490 Q9NR55
BC117491 AAI17492 Q9NR55
HQ258061 ADR82815  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BATF3 NP_061134 R.norvegicus Batf3 60462   NP_068637 88
M.musculus Batf3 381319 Gene Info NP_084336 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)