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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MRPL42, mitochondrial ribosomal protein L42
Sequence ID:NM_014050
NM_172177
NR_038159
NR_038160
NR_038161
NM_172178
Entrez Gene ID:28977
Ensembl ID:ENSG00000198015

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 93861287 - 93895563

 Exon Info From UCSC:
NM_014050
NM_172177
NM_172178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3445213Full LengthBC040240mitochondrial ribosomal protein L42

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014050 NP_054769 Q9Y6G3  
NM_172177 NP_751917 Q9Y6G3  

Related Sequences

 
mRNAGenPeptSwissProt
AF078860 AAD44492 Q9Y6G3
AF151038 AAF36124 Q9Y6G3
AF135160 AAF43784 Q9Y6G3
BC040240 AAH40240 Q9Y6G3
EU832289 ACE87546  
AK000285 BAA91054 Q9Y6G3
AL136659 CAB66594 Q9Y6G3
CR533495 CAG38526 Q9Y6G3
CR749344 CAH18197 Q68DM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL42 NP_054769 R.norvegicus Mrpl42 299743   NP_001100252 78
M.musculus Mrpl42 67270 Gene Info NP_080341 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)