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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CXADR, coxsackie virus and adenovirus receptor
Sequence ID:NM_001207063
NM_001207064
NM_001207065
NM_001207066
NM_001338
RefSeqGene ID:NG_029458
Entrez Gene ID:1525
Ensembl ID:ENSG00000154639

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 18885447 - 18937929

Transcript StartTranscript EndChromosomal Start Chromosomal End
11611888532918885489
1623281891934418919510
3295331892406618924270
5346891893129318931448
6908121893301918933141
8139511893365518933793
95224701893774518939263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3456544Full LengthBC010536coxsackie virus and adenovirus receptor
3463613Full LengthBC003684coxsackie virus and adenovirus receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001329  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001207063 NP_001193992    
NM_001207064 NP_001193993    
NM_001207065 NP_001193994    
NM_001207066 NP_001193995    
NM_001338 NP_001329 P78310 I-set
V-set

Related Sequences

 
mRNAGenPeptSwissProt
U90716 AAC51234 P78310
AF124598 AAD31772 P78310
BC003684 AAH03684 P78310
BC010536 AAH10536 P78310
AY072910 AAL68878 P78310
AY072911 AAL68879 P78310
AY072912 AAL68880 P78310
BT019876 AAV38679 P78310
DQ891181 ABM82107  
DQ894363 ABM85289  
GU474812 ADC84500 D3YHP0
AK313526 BAG36305 P78310
Y07593 CAA68868 P78310

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXADR NP_001329 R.norvegicus Cxadr 89843   NP_446022 91
M.musculus Cxadr 13052 Gene Info NP_001020363 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)