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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GBP1, guanylate binding protein 1, interferon-inducible
Sequence ID:NM_002053
Entrez Gene ID:2633
Ensembl ID:ENSG00000117228

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 89518000 - 89531002

 Exon Info From UCSC:
NM_002053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3606865Full LengthBC002666guanylate binding protein 1, interferon-inducible, 67kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002053 NP_002044 P32455 GBP
GBP_C

Related Sequences

 
mRNAGenPeptSwissProt
M55542 AAA35871 P32455
BC002666 AAH02666 P32455
BT006847 AAP35493 P32455
AY920436 AAX13805 Q5D1D5
DQ890759 ABM81685  
DQ893924 ABM84850  
AB208912 BAD92149 Q59H47
AK291783 BAF84472 P32455
AK298032 BAG60334 B4DNS2
AK303893 BAG64827 B4E1L5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GBP1 NP_002044 R.norvegicus Gbp1 304266   XP_221882 73
A.thaliana AT5G46070 834648   NP_199419 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)