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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCGB3A1, Secretoglobin, family 3A, member 1
Sequence ID:NM_052863
Entrez Gene ID:92304
Ensembl ID:ENSG00000161055

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 180017104 - 180018483

NM_052863 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
53201180017105180017253
202440180017599180017837
441517180018410180018486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180304Full LengthBC029176secretoglobin, family 3A, member 1
5753142Full LengthBC072673secretoglobin, family 3A, member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052863 NP_443095 Q96QR1  

Related Sequences

 
mRNAGenPeptSwissProt
BC029176 AAH29176 Q96QR1
BC072673 AAH72673 Q96QR1
AY040564 AAK82942 Q96QR1
AF313458 AAL26217 Q96QR1
AF436839 AAQ04481 Q96QR1
AY359064 AAQ89423 Q96QR1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCGB3A1 NP_443095 R.norvegicus Scgb3a1 338418   NP_001013198 63
M.musculus Scgb3a1 68662 Gene Info NP_473378 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)