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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHRNB4, cholinergic receptor, nicotinic, beta 4 (neuronal)
Sequence ID:NM_000750
NM_001256567
Entrez Gene ID:1143
Ensembl ID:ENSG00000117971

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78921694 - 78952874

Transcript StartTranscript EndChromosomal Start Chromosomal End
19987891663578917632
99919777892130878922286
197820877892341778923526
208821327892362978923673
213322817892778078927928
228224487893342078933586

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40000733Full LengthBC096080cholinergic receptor, nicotinic, beta 4
40000737Full LengthBC096082cholinergic receptor, nicotinic, beta 4
40000736IncompleteBC096081cholinergic receptor, nicotinic, beta 4
40000738IncompleteBC096083cholinergic receptor, nicotinic, beta 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000741  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000750 NP_000741 P30926 Neur_chan_LBD
Neur_chan_memb
NM_001256567 NP_001243496    

Related Sequences

 
mRNAGenPeptSwissProt
U48861 AAA92123 P30926
U62439 AAB40117 P30926
BC096080 AAH96080 P30926
BC096081 AAH96081 A4FTX5
BC096082 AAH96082 P30926
BC096083 AAH96083 A4FTX5
X68275 CAA48336 P30926
Y08416 CAA69693 P30926

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRNB4 NP_000741 M.musculus Chrnb4 108015 Gene Info NP_683746 84
R.norvegicus Chrnb4 25103   NP_434693 83
A.gambiae AgaP_AGAP002971 1272992   XP_311925 49
D.melanogaster nAcRbeta-96A 42920   NP_524483 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)