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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLR1, toll-like receptor 1
Sequence ID:NM_003263
RefSeqGene ID:NG_016228
Entrez Gene ID:7096
Ensembl ID:ENSG00000174125

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEPROSYTLR2

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_003263 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1926603879787738800518
266127523880247738802568
275328293880592638806002
283028673880637438806411

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3063206Full LengthBC089403toll-like receptor 1
40034681Full LengthBC109093toll-like receptor 1
40034683Full LengthBC109094toll-like receptor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003263 NP_003254 Q15399
Q32MK4
LRR_1
LRRCT
TIR

Related Sequences

 
mRNAGenPeptSwissProt
U88540 AAC34137 Q15399
BC089403 AAH89403 Q5FWG5
BC109093 AAI09094 Q32MK4
BC109094 AAI09095 Q15399
DQ012254 AAY85633 D1CS34
DQ012255 AAY85634 D1CS35
DQ012256 AAY85635 D1CS36
DQ012257 AAY85636 D1CS34
DQ012258 AAY85637 D1CS38
DQ012259 AAY85638 Q15399
DQ012260 AAY85639 Q15399
Q32MK4
DQ012261 AAY85640 Q15399
DQ012262 AAY85641 D1CS42
DQ012263 AAY85642 D1CS43
DQ012264 AAY85643 D1CS44
D13637 BAA02801 Q15399
AK292982 BAF85671 A8KAB7
AB445617 BAG55014 Q32MK4
AL050262 CAB43364 Q15399
CR533562 CAG38593 Q6FI64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLR1 NP_003254 M.musculus Tlr1 21897 Gene Info NP_109607 74
R.norvegicus LOC100363038 100363038   XP_002728155 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)