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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OR5K1, Olfactory receptor, family 5, subfamily K, member 1
Sequence ID:NM_001004736
Entrez Gene ID:26339
Ensembl ID:ENSG00000232382

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 98188323 - 98189420

NM_001004736 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19519818842098189370

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020909Full LengthBC136918olfactory receptor, family 5, subfamily K, member 1
9020910Full LengthBC136919olfactory receptor, family 5, subfamily K, member 1
100015821Full LengthBC148752olfactory receptor, family 5, subfamily K, member 1
100015246BC146325olfactory receptor, family 5, subfamily K, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004736  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004736 NP_001004736 Q8NHB7 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC136918 AAI36919 Q8NHB7
BC136919 AAI36920 Q8NHB7
BC146325 AAI46326  
BC148752 AAI48753  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OR5K1 NP_001004736 M.musculus Olfr173 259002 Gene Info NP_667211 85
M.musculus Olfr172 259003 Gene Info NP_667212 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)