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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFRSF11A, tumor necrosis factor receptor superfamily, member 11a, NFKB activator
Sequence ID:NM_001270949
NM_001270950
NM_001270951
NM_003839
RefSeqGene ID:NG_008098
Entrez Gene ID:8792
Ensembl ID:ENSG00000141655

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOLYSIS, FAMILIAL EXPANSILE 
OSTEOPETROSIS, AUTOSOMAL RECESSIVE 7 
OSTEOSARCOMACHEK2
CHEK2
RB1
TP53
TP53
PAGET DISEASE OF BONESQSTM1

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 60052723 - 60053213

Transcript StartTranscript EndChromosomal Start Chromosomal End
11135999254759992659
1141956001540060015481
1963216001704460017169
3224656002162360021766
4665596002548060025573
5606546002718760027281
6557686002891260029025
7698216003394060033992
82216056003593360036716
160631246005198360053501

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016154BC152906tumor necrosis factor receptor superfamily, member 11a, NFKB activator

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270949 NP_001257878    
NM_001270950 NP_001257879    
NM_001270951 NP_001257880    
NM_003839 NP_003830 Q9Y6Q6 TNFR_c6

Related Sequences

 
mRNAGenPeptSwissProt
AF018253 AAB86809 Q9Y6Q6
BC152906 AAI52907  
AB209762 BAD92999 Q59EP9
HE647782 CCF23032 I4EC36
HE649916 CCF55033 I4EC38
HE649917 CCF55034 I4EC39
HE659518 CCF77738 I7JE63

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFRSF11A NP_003830 M.musculus Tnfrsf11a 21934 Gene Info NP_033425 70
R.norvegicus Tnfrsf11a 498206   XP_573424 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta