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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOPX, HOP homeobox
Sequence ID:NM_001145459
NM_001145460
NM_032495
NM_139211
NM_139212
Entrez Gene ID:84525
Ensembl ID:ENSG00000171476

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 57514727 - 57522060

 Exon Info From UCSC:
NM_001145459
NM_001145460
NM_032495
NM_139211
NM_139212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4335211Full LengthBC014225HOP homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115884  NP_631957  NP_631958  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145459 NP_001138931    
NM_001145460 NP_001138932    
NM_032495 NP_115884 Q9BPY8 Homeobox
NM_139211 NP_631957 Q9BPY8 Homeobox
NM_139212 NP_631958 Q9BPY8 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC014225 AAH14225 Q9BPY8
AF454763 AAL56613 Q9BPY8
AF492675 AAM46827 Q9BPY8
AF492676 AAM46828 Q9BPY8
AF492677 AAM46829 Q9BPY8
AF492678 AAM46830 Q9BPY8
AF492679 AAM46831 Q9BPY8
AF492680 AAM46832 Q9BPY8
AF492681 AAM46833 Q9BPY8
DQ892193 ABM83119  
EU176669 ABW03470  
AB059408 BAB40926 Q9BPY8
AB059409 BAB40927 Q9BPY8
AB059410 BAB40928 Q9BPY8
AK289707 BAF82396 Q9BPY8
AM393649 CAL38525  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOPX NP_115884 R.norvegicus Hopx 171160   NP_598305 92
M.musculus Hopx 74318 Gene Info NP_783199 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta