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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACAN, aggrecan
Sequence ID:NM_001135
NM_013227
RefSeqGene ID:NG_012794
Entrez Gene ID:176
Ensembl ID:ENSG00000157766

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOCHONDRITIS DISSECANS, SHORT STATURE, AND EARLY-ONSET OSTEOARTHRITIS 
SPONDYLOEPIMETAPHYSEAL DYSPLASIA, AGGRECAN TYPE 
SPONDYLOEPIPHYSEAL DYSPLASIA, KIMBERLEY TYPE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 89346666 - 89347046

 Exon Info From UCSC:
NM_001135
NM_013227

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056994Full LengthBC150624aggrecan

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135 NP_001126    
NM_013227 NP_037359    

Related Sequences

 
mRNAGenPeptSwissProt
J05062 AAA35726 P16112
M55172 AAA62824 P16112
BC036445 AAH36445 Q6PID9
BC150624 AAI50625 B9EK55
AK290723 BAF83412  
X17406 CAA35463 P16112

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACAN NP_001126 M.musculus Acan 11595 Gene Info NP_031450 67
R.norvegicus Acan 58968   NP_071526 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)