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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GPC6, glypican 6
Sequence ID:NM_005708
RefSeqGene ID:NG_011880
Entrez Gene ID:10082
Ensembl ID:ENSG00000183098

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_005708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17929387907793879868
7939519419751594197673
95213439448240694482797
134415099467998294680147
151016409493860294938732
164117849495823394958376
178519219503466795034803
192220979505071995050894
209870969505526895060266

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40034564Full LengthBC106947glypican 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005708 NP_005699 Q9Y625 Glypican

Related Sequences

 
mRNAGenPeptSwissProt
AF111178 AAD31392 Q9Y625
AF105267 AAD55749 Q9Y625
BC106947 AAI06948 Q9Y625
AY358462 AAQ88827 Q9Y625
AK290144 BAF82833 Q9Y625
AK304338 BAG65183 B4E2M1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPC6 NP_005699 M.musculus Gpc6 23888 Gene Info NP_035951 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)