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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPGR, retinitis pigmentosa GTPase regulator
Sequence ID:NM_000328
NM_001034853
NM_001023582
RefSeqGene ID:NG_009553
Entrez Gene ID:6103
Ensembl ID:ENSG00000156313

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONE-ROD DYSTROPHY-1 
MACULAR DEGENERATION, X-LINKED ATROPHIC 
RETINITIS PIGMENTOSA 3 
RETINITIS PIGMENTOSA, X-LINKED, AND SINORESPIRATORY INFECTIONS, WITH OR WITHOUT DEAFNESS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 38128601 - 38186762

 Exon Info From UCSC:
NM_000328
NM_001034853

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000319  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000328 NP_000319   RCC1
NM_001034853 NP_001030025    

Related Sequences

 
mRNAGenPeptSwissProt
U57629 AAC50481 Q92834
BC031624 AAH31624 Q92834
JF432801 ADZ16018  
AK223491 BAD97211 Q53EZ8
AK291832 BAF84521 A8K717
X97668 CAA66258 Q92834
AJ238395 CAB54002 Q92834
BK005711 DAA05713 Q3KN84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPGR NP_001030025 R.norvegicus Rpgr 367733   NP_001121073 64
M.musculus Rpgr 19893 Gene Info NP_001171421 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)