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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZDHHC3, Zinc finger, DHHC-type containing 3
Sequence ID:NM_016598
NM_001135179
Entrez Gene ID:51304
Ensembl ID:ENSG00000163812

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 44966666 - 44967966

 Exon Info From UCSC:
NM_016598
NM_001135179

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3852521Full LengthBC015467zinc finger, DHHC-type containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057682  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135179 NP_001128651    
NM_016598 NP_057682 Q9NYG2 zf-DHHC

Related Sequences

 
mRNAGenPeptSwissProt
AF247703 AAF63570 Q9NYG2
BC015467 AAH15467 Q9NYG2
AF441791 AAL34547 Q9NYG2
AY605661 AAV83779 Q9NYG2
EU832057 ACE86719  
EU831964 ACE87405  
GQ129398 ACT64532  
GQ129399 ACT64533  
AK299782 BAG61664 B4DSK2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZDHHC3 NP_001128651 R.norvegicus Zdhhc3 301081   NP_001034103 98
M.musculus Zdhhc3 69035 Gene Info NP_081193 97
D.melanogaster CG8314 36757   NP_611070 64
A.gambiae AgaP_AGAP003613 1274276   XP_313372 62
C.elegans F33D11.12 172257   NP_491702 58
P.falciparum PFB0725c 812746   XP_001349664 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)