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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA7, Homeobox A7
Sequence ID:NM_006896
Entrez Gene ID:3204
Ensembl ID:ENSG00000122592

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27186781 - 27193904

NM_006896 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
615072719333927194840
150820182719578527196295

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015699Full LengthBC148692homeobox A7
100014451BC140401homeobox A7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008827  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006896 NP_008827 P31268 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF026397 AAB94604 P31268
BC140401 AAI40402  
BC148692 AAI48693  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA7 NP_008827 M.musculus Hoxa7 15404 Gene Info NP_034585 92
R.norvegicus Hoxa9 500126   NP_001102703 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta