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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTSL2, cathepsin L2
Sequence ID:NM_001201575
NM_001333
Entrez Gene ID:1515
Ensembl ID:ENSG00000136943

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 99794937 - 99801415

Transcript StartTranscript EndChromosomal Start Chromosomal End
43949979493999795329
3955129979700799797124
5136789979780999797974
6799039979880499799028
90410509979953399799679
105111739979977499799896
117413099980019999800334
131014969980135299801538

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3139314Full LengthBC023504cathepsin L2
40031744Full LengthBC110512cathepsin L2
30377884IncompleteBC067289cathepsin L2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001324  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001201575 NP_001188504      
NM_001333 NP_001324 O60911 EC 3.4.22.43 Peptidase_C1
Inhibitor_I29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF070448 AAC23598 O60911 EC 3.4.22.43
BC023504 AAH23504 O60911 EC 3.4.22.43
BC110512 AAI10513 O60911 EC 3.4.22.43
AY358641 AAQ89004 O60911 EC 3.4.22.43
AB001928 BAA25909 O60911 EC 3.4.22.43
AK312806 BAG35664 B2R717  
Y14734 CAA75029 O60911 EC 3.4.22.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTSL2 NP_001188504 R.norvegicus Ctsl1 25697   NP_037288 76
M.musculus Ctsl 13039 Gene Info NP_034114 76
D.melanogaster Cp1 36546   NP_523735 54
A.gambiae AgaP_AGAP011828 5667926   XP_001689282 54
C.elegans cpl-1 180111   NP_507199 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)